LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-214-3p


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-214-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
109878-109900
0.009
0
8mer
130921-130943
0.009
2
8mer
112265-112276
0.009
0
8mer
56826-56847
0.008
1
7mer
240690-240707
0.008
1
8mer
120100-120118
0.007
7
7mer
81505-81529
0.007
9
9mer
13216-13236
0.007
5
7mer
55575-55588
0.007
2
7mer
226797-226812
0.006
1
8mer
118883-118905
0.006
1
7mer
120302-120319
0.005
8
7mer
142424-142438
0.005
3
7mer
259728-259742
0.005
0
7mer
1327-1352
0.005
3
7mer
154153-154174
0.004
1
7mer
78683-78704
0.004
1
7mer
39536-39551
0.004
4
7mer
115861-115883
0.004
1
7mer
142575-142588
0.004
3
7mer
107545-107570
0.004
5
7mer
188212-188236
0.004
1
7mer
266165-266187
0.004
0
8mer
96537-96553
0.004
2
8mer
246632-246649
0.003
0
8mer
2199-2221
0.003
1
7mer
18055-18076
0.003
0
6mer
163536-163563
0.003
8
6mer
123824-123828
0.003
9
7mer
139702-139726
0.003
3
7mer
166944-166961
0.003
0
8mer
265905-265930
0.003
3
7mer
21745-21766
0.003
0
7mer
5324-5346
0.003
6
7mer
19889-19911
0.003
1
7mer
128808-128829
0.003
4
7mer
23948-23973
0.003
Not Conserved
7mer
32063-32080
0.003
2
7mer
222452-222460
0.003
1
7mer
185461-185478
0.003
2
8mer
73923-73935
0.003
0
6mer
35337-35360
0.003
3
6mer
56561-56587
0.003
2
6mer
7221-7245
0.003
3
6mer
30741-30755
0.002
1
6mer
207447-207462
0.002
6
7mer
261043-261061
0.002
1
7mer
225939-225966
0.002
Not Conserved
8mer
214000-214017
0.002
4
8mer
5436-5456
0.002
1
7mer
180326-180345
0.002
1
7mer
198244-198261
0.002
2
7mer
156954-156977
0.002
1
7mer
212070-212075
0.002
2
6mer
200745-200762
0.002
0
7mer
139217-139239
0.002
4
6mer
135678-135693
0.002
4
6mer
12933-12948
0.002
8
6mer
20377-20396
0.002
2
7mer
74586-74605
0.002
2
6mer
33230-33248
0.002
1
7mer
242240-242258
0.002
1
6mer
249209-249234
0.002
0
6mer
150603-150627
0.002
4
7mer
211533-211550
0.002
1
6mer
7628-7643
0.002
3
7mer
94249-94267
0.002
0
7mer
101087-101107
0.002
0
7mer
21459-21476
0.002
3
6mer
22034-22058
0.002
7
6mer
48155-48178
0.002
4
6mer
118229-118250
0.002
8
7mer
204033-204050
0.002
0
6mer
115618-115643
0.002
1
6mer
176676-176699
0.002
3
6mer
6872-6895
0.002
4
6mer
150090-150111
0.002
8
8mer
255198-255211
0.002
0
7mer
130235-130251
0.002
2
6mer
81013-81038
0.002
2
7mer
76363-76389
0.002
1
6mer
153119-153137
0.002
2
6mer
48793-48819
0.002
2
6mer
178503-178527
0.002
4
6mer
88015-88035
0.002
1
6mer
54798-54802
0.002
4
7mer
122074-122089
0.002
1
6mer
13065-13089
0.002
8
7mer
239742-239759
0.002
1
7mer
257804-257830
0.002
3
6mer
121893-121919
0.002
0
6mer
79334-79358
0.002
3
6mer
74950-74975
0.002
4
6mer
45712-45737
0.002
1
6mer
7451-7463
0.002
1
6mer
49178-49197
0.002
2
6mer
206906-206927
0.002
4
6mer
99431-99435
0.002
2
6mer
34670-34688
0.002
1
6mer
37069-37093
0.002
1
6mer
13930-13934
0.002
3
7mer
236141-236161
0.002
0
6mer
168093-168115
0.002
0
6mer
183102-183125
0.002
Not Conserved
6mer
258427-258442
0.002
2
6mer
259246-259271
0.002
0
6mer
131724-131751
0.002
1
8mer
214224-214242
0.002
0
6mer
72101-72117
0.002
1
6mer
48355-48369
0.002
1
6mer
231638-231658
0.002
0
6mer
260887-260914
0.002
1
6mer
244923-244942
0.002
0
7mer
79649-79665
0.002
1
7mer
176949-176965
0.002
2
8mer
129448-129461
0.002
1
6mer
9541-9558
0.001
0
6mer
29097-29113
0.001
4
6mer
109198-109225
0.001
2
6mer
236062-236085
0.001
0
6mer
139066-139092
0.001
1
6mer
13393-13414
0.001
1
6mer
72226-72250
0.001
1
7mer
54112-54126
0.001
1
6mer
245431-245451
0.001
0
6mer
82869-82894
0.001
2
6mer
53778-53791
0.001
3
6mer
179844-179861
0.001
1
7mer
104649-104668
0.001
0
6mer
4871-4889
0.001
0
6mer
248240-248264
0.001
0
6mer
88970-88982
0.001
1
6mer
21918-21937
0.001
1
6mer
103918-103938
0.001
0
6mer
62819-62834
0.001
Not Conserved
6mer
199421-199436
0.001
1
6mer
124540-124561
0.001
3
6mer
214626-214648
0.001
1
6mer
182147-182169
0.001
1
6mer
185855-185868
0.001
1
6mer
30898-30922
0.001
1
6mer
170256-170282
0.001
0
6mer
80679-80696
0.001
0
6mer
90498-90514
0.001
1
6mer
146001-146019
0.001
1
6mer
246520-246542
0.001
0
6mer
95143-95161
0.001
1
7mer
140817-140838
0.001
1
6mer
153881-153897
0.001
1
7mer
87139-87158
0.001
1
6mer
97419-97435
0.001
0
6mer
247629-247651
0.001
0
6mer
198936-198950
0.001
1
6mer
214367-214392
0.001
0
6mer
2348-2372
0.001
0
6mer
83893-83917
0.001
0
6mer
94633-94647
0.001
2
6mer
256024-256039
0.001
1
6mer
117242-117267
0.001
1
6mer
6417-6437
0.001
0
6mer
180450-180465
0.001
1
8mer
130281-130297
0.001
1
6mer
226438-226451
0.001
1
6mer
66868-66894
0.001
2
6mer
6282-6307
0.001
0
6mer
192653-192680
0.001
0
6mer
60399-60425
0.001
1
6mer
82965-82983
0.001
2
6mer
213762-213782
0.001
1
6mer
123058-123082
0.001
Not Conserved
6mer
159869-159895
0.001
1
6mer
96354-96377
0.001
0
6mer
156972-156995
0.001
0
6mer
216620-216638
0.001
0
6mer
117975-117996
0.001
1
6mer
252087-252106
0.001
1
6mer
103690-103708
0.001
0
6mer
136383-136399
0.001
1
6mer
140153-140174
0.001
1
7mer
128855-128876
0.001
3
6mer
120653-120679
0.001
0
6mer
159132-159148
0.001
1
6mer
217539-217563
0.001
1
6mer
226529-226554
0.001
3
6mer
217169-217195
0.001
0
6mer
54908-54935
0.001
1
6mer
179945-179963
0.001
0
6mer
200757-200777
0.001
1
7mer
179945-179967
0.001
0
6mer
234895-234915
0.001
Not Conserved
6mer
214430-214454
0.001
3
6mer
52632-52651
0.001
0
7mer
72276-72301
0.001
1
6mer
55013-55035
0.001
0
6mer
179987-180013
0.001
5
6mer
255059-255083
0.001
0
6mer
256048-256067
0.001
1
7mer
49256-49272
0.000
1
6mer
236189-236206
0.000
2
6mer
185855-185871
0.000
1
6mer
12935-12951
0.000
2
6mer
120100-120121
0.000
7
6mer
72101-72120
0.000
1
7mer
211548-211572
0.000
0
7mer
142621-142626
0.000
Not Conserved
6mer
213863-213880
0.000
1
6mer
242257-242282
0.000
Not Conserved
FLJ26245
hsa-miR-214-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000566900
Biotype: lincRNA
Gene id: ENSG00000261122
Gene Name: FLJ26245
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
1384-1401
0.077
0
7mer
1043-1058
0.069
0
7mer
873-890
0.048
0
8mer
357-371
0.042
0
XLOC_013778
hsa-miR-214-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028426
Biotype: transcript isomorph
Gene id: XLOC_013778
Gene Name: XLOC_013778
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
385-396
0.018
0
7mer
123-145
0.012
0
7mer
226-249
0.010
0
7mer
538-563
0.007
0
6mer
12-24
0.006
1
7mer
67-82
0.006
Not Conserved
7mer
281-297
0.006
Not Conserved
7mer
486-503
0.005
1
7mer
752-774
0.005
0
7mer
911-934
0.005
1
7mer
3815-3827
0.004
0
7mer
2149-2172
0.004
Not Conserved
7mer
646-670
0.004
0
7mer
3242-3265
0.003
0
7mer
699-711
0.003
0
7mer
1569-1588
0.003
0
7mer
963-971
0.003
1
7mer
1069-1096
0.003
1
7mer
1267-1290
0.003
1
7mer
4637-4648
0.003
0
7mer
2889-2912
0.003
Not Conserved
6mer
436-462
0.003
0
7mer
1016-1028
0.003
0
7mer
3558-3580
0.002
0
7mer
3974-3986
0.002
0
7mer
1122-1145
0.002
1
7mer
1316-1337
0.002
Not Conserved
7mer
1214-1222
0.002
0
7mer
2045-2066
0.002
Not Conserved
7mer
4186-4198
0.002
Not Conserved
7mer
2464-2487
0.002
Not Conserved
7mer
1939-1957
0.002
Not Conserved
6mer
5763-5785
0.002
1
7mer
4479-4491
0.002
0
7mer
1414-1426
0.002
1
7mer
3402-3425
0.002
0
7mer
2783-2806
0.002
0
7mer
2836-2859
0.001
Not Conserved
7mer
4133-4156
0.001
Not Conserved
7mer
1517-1539
0.001
0
6mer
2520-2546
0.001
Not Conserved
7mer
4080-4091
0.001
0
6mer
1465-1491
0.001
1
6mer
3453-3476
0.001
0
7mer
3506-3528
0.001
0
7mer
2412-2437
0.001
Not Conserved
6mer
3660-3680
0.001
Not Conserved
6mer
2359-2382
0.001
Not Conserved
6mer
4585-4596
0.000
0
RP3-323A16.1
hsa-miR-214-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
53572-53593
0.024
1
8mer
30275-30288
0.011
0
7mer
48987-49005
0.010
0
7mer
39379-39404
0.010
3
8mer
33164-33179
0.008
1
7mer
52973-52988
0.006
0
7mer
24488-24505
0.006
1
8mer
39919-39935
0.005
Not Conserved
6mer
53951-53969
0.004
0
7mer
14359-14386
0.003
0
8mer
51948-51959
0.003
0
7mer
30578-30591
0.002
0
6mer
37078-37094
0.002
7
8mer
29370-29392
0.002
Not Conserved
7mer
52426-52433
0.002
1
6mer
23021-23041
0.002
2
6mer
35764-35786
0.002
3
8mer
42719-42738
0.002
1
6mer
45142-45152
0.002
2
6mer
682-704
0.002
1
6mer
1531-1544
0.002
3
7mer
11116-11131
0.002
Not Conserved
6mer
38456-38471
0.002
1
6mer
1138-1164
0.001
1
7mer
31453-31470
0.001
0
6mer
42320-42344
0.001
1
7mer
42352-42374
0.001
1
6mer
44570-44596
0.001
0
6mer
4477-4495
0.001
1
6mer
15138-15158
0.001
1
6mer
34015-34034
0.001
Not Conserved
6mer
5558-5580
0.001
0
6mer
52207-52229
0.001
1
6mer
6926-6948
0.001
0
6mer
25868-25882
0.001
0
6mer
47221-47242
0.001
0
6mer
51350-51366
0.001
1
6mer
24268-24279
0.001
0
6mer
17700-17717
0.001
0
6mer
38129-38146
0.001
0
6mer
15254-15277
0.001
1
7mer
38176-38198
0.001
Not Conserved
6mer
39927-39938
0.000
1
6mer
17753-17772
0.000
2
XLOC_013502
hsa-miR-214-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00027863
Biotype: transcript isomorph
Gene id: XLOC_013502
Gene Name: XLOC_013502
UCSC graphic: -
Expression:
  Cell Line Tissue Category
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4373-4390
0.031
0
7mer
4020-4046
0.021
0
8mer
3255-3274
0.019
0
7mer
2742-2756
0.011
0
7mer
2052-2072
0.011
0
7mer
3427-3443
0.011
Not Conserved
6mer
4544-4562
0.008
0
6mer
378-404
0.006
0
6mer
500-521
0.005
0
6mer
2567-2584
0.004
0
6mer
1731-1736
0.002
0
6mer
1646-1671
0.002
Not Conserved
RP4-760C5.5
hsa-miR-214-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000449316
Biotype: lincRNA
Gene id: ENSG00000226203
Gene Name: RP4-760C5.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
4378-4395
0.030
0
7mer
4025-4051
0.021
0
8mer
3260-3279
0.019
0
7mer
2747-2761
0.011
0
7mer
2057-2077
0.011
0
7mer
3432-3448
0.011
Not Conserved
6mer
4549-4567
0.008
0
6mer
383-409
0.006
0
6mer
505-526
0.005
0
6mer
2572-2589
0.004
0
6mer
1736-1741
0.002
0
6mer
1651-1676
0.002
Not Conserved
PCAT19
hsa-miR-214-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000599801
Biotype: lincRNA
Gene id: ENSG00000267107
Gene Name: PCAT19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
94-121
0.068
1
9mer
134-160
0.041
0
6mer
83-101
0.010
1
6mer
117-141
0.007
0
XLOC_013773
hsa-miR-214-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr20
Transcript: TCONS_00028422
Biotype: transcript isomorph
Gene id: XLOC_013773
Gene Name: XLOC_013773
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
41-53
0.018
1
7mer
147-167
0.012
1
7mer
252-264
0.011
0
7mer
622-645
0.007
0
7mer
5479-5491
0.007
0
7mer
5641-5665
0.006
Not Conserved
6mer
460-472
0.005
1
7mer
1207-1230
0.004
0
6mer
783-804
0.004
1
7mer
2883-2897
0.003
0
7mer
1042-1054
0.003
Not Conserved
7mer
1343-1358
0.003
0
7mer
835-847
0.003
Not Conserved
6mer
888-896
0.002
0
7mer
3233-3256
0.002
0
7mer
1151-1166
0.002
0
6mer
3393-3411
0.002
0
6mer
5539-5557
0.002
Not Conserved
7mer
1961-1984
0.002
Not Conserved
7mer
2123-2146
0.002
Not Conserved
7mer
2354-2377
0.002
0
7mer
1451-1463
0.002
Not Conserved
7mer
2259-2274
0.002
Not Conserved
6mer
5536-5557
0.001
Not Conserved
6mer
1614-1633
0.001
Not Conserved
7mer
2458-2469
0.001
0
7mer
2511-2523
0.001
Not Conserved
7mer
2620-2635
0.001
Not Conserved
7mer
3337-3345
0.001
0
6mer
1155-1166
0.001
0
7mer
2573-2598
0.001
Not Conserved
6mer
2624-2635
0.001
0
6mer
4231-4253
0.001
Not Conserved
7mer
2235-2261
0.001
Not Conserved
6mer
3766-3790
0.001
Not Conserved
7mer
2070-2082
0.001
Not Conserved
6mer
2725-2735
0.001
Not Conserved
6mer
3341-3366
0.001
0
6mer
2567-2578
0.001
0
6mer
2462-2488
0.001
0
6mer
2465-2489
0.000
Not Conserved
6mer
3668-3692
0.000
Not Conserved
KCNQ1OT1
hsa-miR-214-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
69463-69468
0.008
2
7mer
68730-68750
0.005
0
8mer
3850-3865
0.004
0
7mer
73678-73697
0.004
1
7mer
81307-81328
0.003
1
8mer
81756-81771
0.003
1
8mer
44752-44772
0.003
1
7mer
44808-44825
0.003
0
8mer
69093-69120
0.003
0
7mer
82455-82467
0.003
1
8mer
59904-59919
0.003
1
8mer
77417-77438
0.002
1
6mer
49816-49837
0.002
3
6mer
18045-18049
0.002
1
6mer
14138-14146
0.002
0
8mer
64785-64804
0.002
1
6mer
75759-75780
0.002
1
6mer
43851-43877
0.002
5
7mer
63297-63315
0.002
2
6mer
79586-79602
0.002
4
7mer
63131-63151
0.002
1
6mer
52320-52343
0.002
1
6mer
67433-67452
0.002
3
6mer
85049-85068
0.002
3
8mer
3835-3858
0.002
1
6mer
89806-89822
0.002
3
6mer
40406-40416
0.002
0
6mer
27534-27548
0.001
Not Conserved
7mer
65624-65648
0.001
1
6mer
88170-88185
0.001
1
6mer
36775-36801
0.001
0
6mer
47282-47299
0.001
2
6mer
16906-16910
0.001
Not Conserved
6mer
51696-51705
0.001
0
7mer
85943-85963
0.001
0
6mer
78045-78067
0.001
1
6mer
37231-37250
0.001
0
6mer
36489-36511
0.001
0
6mer
29774-29788
0.001
0
7mer
64772-64794
0.001
1
7mer
37449-37465
0.001
0
6mer
23444-23463
0.001
1
6mer
45365-45390
0.001
1
6mer
77250-77267
0.001
0
6mer
60054-60072
0.001
1
6mer
78705-78728
0.001
1
6mer
43624-43647
0.001
1
6mer
43621-43647
0.001
5
6mer
70826-70839
0.001
1
6mer
42898-42920
0.001
1
6mer
77919-77940
0.001
1
6mer
46334-46346
0.001
0
6mer
54902-54921
0.001
0
6mer
61007-61025
0.001
0
6mer
31179-31198
0.001
0
6mer
56170-56195
0.001
1
6mer
23380-23401
0.001
1
6mer
53577-53602
0.001
0
6mer
77844-77865
0.001
1
6mer
37171-37190
0.001
0
6mer
36609-36621
0.001
Not Conserved
6mer
31176-31198
0.000
0
AC006548.28
hsa-miR-214-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
82959-82980
0.005
1
7mer
74609-74628
0.005
0
8mer
63378-63402
0.004
1
8mer
22273-22290
0.004
Not Conserved
7mer
82992-83009
0.003
1
7mer
7118-7144
0.003
1
7mer
8689-8705
0.003
1
8mer
25642-25661
0.003
0
8mer
18246-18261
0.002
2
7mer
6724-6751
0.002
0
6mer
3972-3986
0.002
6
8mer
82022-82042
0.002
1
8mer
9343-9362
0.002
1
6mer
70273-70291
0.002
0
7mer
9961-9972
0.002
1
7mer
60019-60038
0.002
1
8mer
57276-57291
0.002
1
7mer
66918-66934
0.002
Not Conserved
6mer
26264-26279
0.002
1
6mer
13893-13911
0.002
2
6mer
37078-37091
0.002
1
6mer
39112-39131
0.002
0
6mer
27966-27992
0.002
0
6mer
18721-18746
0.002
1
6mer
23094-23106
0.001
0
6mer
57907-57919
0.001
0
7mer
6261-6287
0.001
1
6mer
23341-23353
0.001
2
6mer
38908-38934
0.001
2
6mer
4524-4534
0.001
1
6mer
9560-9583
0.001
1
6mer
64982-64992
0.001
1
6mer
1187-1211
0.001
0
7mer
22111-22136
0.001
1
6mer
35716-35732
0.001
1
6mer
30105-30126
0.001
1
6mer
67934-67955
0.001
0
6mer
12915-12929
0.001
1
6mer
78335-78359
0.001
0
6mer
71429-71450
0.001
Not Conserved
6mer
63085-63094
0.001
1
7mer
23821-23848
0.001
1
6mer
50476-50490
0.001
Not Conserved
6mer
79219-79241
0.001
Not Conserved
7mer
45444-45462
0.001
Not Conserved
6mer
16424-16439
0.001
1
6mer
38664-38680
0.001
0
6mer
25841-25865
0.001
0
6mer
75845-75865
0.001
0
6mer
56499-56518
0.001
0
6mer
19583-19602
0.001
0
6mer
26114-26119
0.001
Not Conserved
6mer
45037-45056
0.001
0
6mer
62525-62549
0.001
0
6mer
5227-5245
0.001
1
6mer
61390-61414
0.001
Not Conserved
6mer
75157-75176
0.001
0
6mer
17845-17863
0.001
0
6mer
6625-6645
0.001
1
6mer
11917-11935
0.001
1
6mer
9785-9806
0.001
1
6mer
18679-18687
0.001
1
6mer
24405-24420
0.001
0
6mer
18561-18579
0.001
0
6mer
23723-23747
0.001
1
6mer
13545-13560
0.001
0
6mer
45360-45387
0.001
Not Conserved
6mer
35633-35653
0.000
1
6mer
74594-74614
0.000
0
6mer
22270-22290
0.000
3
6mer
7101-7123
0.000
1
CTD-3116E22.8
hsa-miR-214-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000613300
Biotype: lincRNA
Gene id: ENSG00000277587
Gene Name: CTD-3116E22.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
146-160
0.059
0
8mer
105-119
0.047
0
RP11-849H4.4
hsa-miR-214-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000502284
Biotype: antisense
Gene id: ENSG00000251143
Gene Name: RP11-849H4.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
404-427
0.018
6
7mer
535-556
0.015
8
7mer
197-211
0.014
7
7mer
209-229
0.012
7
7mer
874-899
0.010
6
8mer
1617-1636
0.006
4
6mer
209-232
0.005
8
6mer
584-604
0.004
8
6mer
1014-1018
0.003
8
6mer
1803-1828
0.003
8
6mer
3030-3041
0.003
4
6mer
1501-1519
0.002
6
6mer
1196-1217
0.002
4
6mer
1337-1351
0.002
4
7mer
3108-3126
0.002
3
6mer
2458-2483
0.001
1
7mer
1862-1879
0.001
1
XLOC_011693
hsa-miR-214-3p
0.996
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024250
Biotype: transcript isomorph
Gene id: XLOC_011693
Gene Name: XLOC_011693
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
210-232
0.068
0
6mer
1795-1813
0.017
0
8mer
1339-1357
0.011
Not Conserved
7mer
847-859
0.004
Not Conserved
7mer
894-907
0.001
Not Conserved
MIR4534
hsa-miR-214-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623111
Biotype: sense_overlapping
Gene id: ENSG00000279010
Gene Name: MIR4534
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
35244-35261
0.006
8
7mer
19030-19055
0.005
5
9mer
16608-16629
0.005
0
8mer
791-806
0.004
0
7mer
20719-20736
0.004
8
8mer
46721-46744
0.004
1
7mer
51738-51756
0.003
1
8mer
52916-52938
0.003
0
7mer
19911-19927
0.003
5
7mer
45041-45065
0.003
1
7mer
3752-3772
0.003
0
8mer
1836-1854
0.003
0
7mer
18517-18543
0.002
2
6mer
22310-22323
0.002
1
7mer
47043-47053
0.002
0
6mer
37903-37921
0.002
7
8mer
23243-23268
0.002
0
6mer
44383-44397
0.002
3
8mer
44576-44594
0.002
1
6mer
19618-19642
0.002
5
6mer
3115-3138
0.002
4
6mer
1519-1534
0.002
0
7mer
44517-44541
0.002
1
7mer
26423-26447
0.002
0
6mer
39211-39237
0.002
1
8mer
41522-41542
0.001
1
7mer
38620-38636
0.001
1
7mer
43497-43515
0.001
1
6mer
23164-23184
0.001
2
6mer
26916-26941
0.001
2
6mer
41752-41773
0.001
2
8mer
50161-50182
0.001
2
6mer
50128-50147
0.001
1
6mer
39397-39409
0.001
1
6mer
16900-16924
0.001
1
8mer
50739-50754
0.001
0
7mer
52449-52475
0.001
0
6mer
48332-48355
0.001
1
6mer
13943-13966
0.001
Not Conserved
6mer
37143-37169
0.001
0
6mer
52265-52278
0.001
2
6mer
42097-42118
0.001
1
6mer
24934-24959
0.001
1
6mer
50835-50853
0.001
3
6mer
8786-8803
0.001
0
7mer
38015-38032
0.001
0
6mer
25579-25603
0.001
Not Conserved
6mer
50245-50271
0.001
4
6mer
18043-18056
0.001
1
6mer
5200-5219
0.001
1
6mer
29380-29396
0.001
2
6mer
38367-38388
0.001
Not Conserved
6mer
6897-6917
0.001
0
7mer
38387-38413
0.001
2
6mer
42138-42161
0.001
4
6mer
46809-46834
0.000
Not Conserved
7mer
23286-23302
0.000
0
6mer
48752-48775
0.000
0
6mer
41534-41560
0.000
1
RP11-445O3.3
hsa-miR-214-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000562127
Biotype: lincRNA
Gene id: ENSG00000260763
Gene Name: RP11-445O3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
110-135
0.069
0
6mer
250-277
0.018
0
6mer
1994-2009
0.007
0
6mer
2308-2326
0.003
Not Conserved
RP1-309I22.2
hsa-miR-214-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624184
Biotype: sense_overlapping
Gene id: ENSG00000279338
Gene Name: RP1-309I22.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
28593-28610
0.015
3
7mer
20639-20650
0.011
8
7mer
28902-28908
0.010
1
6mer
143-163
0.006
3
7mer
27564-27582
0.006
0
8mer
12950-12964
0.005
1
7mer
21635-21647
0.005
1
6mer
23734-23747
0.003
8
8mer
7019-7038
0.003
4
8mer+wobble
1321-1340
0.003
2
7mer
26328-26345
0.003
1
6mer
235-258
0.003
1
7mer
26084-26110
0.002
4
7mer
25458-25477
0.002
0
7mer
4516-4521
0.002
0
6mer
16555-16581
0.002
1
6mer
22808-22817
0.002
4
6mer
16710-16736
0.002
4
6mer
26558-26573
0.002
1
6mer
12672-12690
0.002
2
6mer
6092-6104
0.001
0
6mer
5396-5412
0.001
1
9mer
21912-21934
0.001
0
6mer
1823-1836
0.001
1
6mer
4274-4300
0.001
0
6mer
22437-22455
0.001
1
7mer
6334-6359
0.001
0
6mer
21670-21685
0.001
5
LINC00661
hsa-miR-214-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000549131
Biotype: retained_intron
Gene id: ENSG00000205396
Gene Name: LINC00661
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
41-59
0.051
1
7mer
254-274
0.035
1
6mer
147-170
0.009
0
XLOC_001935
hsa-miR-214-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00005057
Biotype: transcript isomorph
Gene id: XLOC_001935
Gene Name: XLOC_001935
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
565-589
0.071
0
6mer
876-900
0.024
0
PCAT19
hsa-miR-214-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000588495
Biotype: lincRNA
Gene id: ENSG00000267107
Gene Name: PCAT19
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
463-490
0.039
1
9mer
503-529
0.031
0
6mer
452-470
0.006
1
6mer
486-510
0.004
0
6mer
2046-2070
0.004
0
7mer
2477-2495
0.003
0
6mer
2481-2496
0.003
0
6mer
3366-3374
0.002
Not Conserved
XLOC_008075
hsa-miR-214-3p
0.990
mTTBlnEmP

Gene Details
Chromosome: chrX
Transcript: TCONS_00016940
Biotype: transcript isomorph
Gene id: XLOC_008075
Gene Name: XLOC_008075
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-214-3p
Sequence: acagcaggcacagacaggcagu
MirBase ID: MIMAT0000271
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
346-359
0.058
0
6mer
101-116
0.015
0
6mer
145-165
0.013
0
Funded by:
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